ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3f1jA1 - ECOD Domain | ECOD

ECOD/Domains/e3f1jA1

e3f1jA1

UID: 000185232

RepresentativePDB

Range: A:3-142
PDB: 3F1J chain A(all domains)
UniProt: P0C794 (all domains)
Gene: M

Molecule: Matrix protein

3D Structure

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Related Domains

Browse other domains in BDV_M →

Classification

AArchitecturebeta barrels(a.1)

XX-groupEV matrix protein(54)

HH-groupEV matrix protein(54.1)

TT-groupEV matrix protein(54.1.1)

FFamilyBDV_M(54.1.1.4)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-MonophosphateC5P
drugDrugBank DB03403

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF16520Matrix_Borna

ssRNA-binding matrix protein of Bornaviridae

ClanCL0844Matrix_Mononaga

External Links

ECOD PDB View: 3F1J RCSB PDB: 3F1J PDBe: 3F1J UniProt: P0C794

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.