ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3g2bA1 - ECOD Domain | ECOD

ECOD/Domains/e3g2bA1

e3g2bA1

UID: 000185279

RepresentativePDB

Range: A:3-92
PDB: 3G2B chain A(all domains)
UniProt: Q8P6M8 (all domains)
Gene: pqqD

Molecule: Coenzyme PQQ synthesis protein D

3D Structure

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Related Domains

Browse other domains in PqqD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyPqqD(101.1.2.70)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Coenzyme PQQ synthesis protein D (PqqD)

ClanCL0123HTH

External Links

ECOD PDB View: 3G2B RCSB PDB: 3G2B PDBe: 3G2B UniProt: Q8P6M8

Downloads

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