ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3imnA1 - ECOD Domain | ECOD

ECOD/Domains/e3imnA1

e3imnA1

UID: 000185344

RepresentativePDB

Range: A:7-156,A:222-378
PDB: 3IMN chain A(all domains)
UniProt: Q89YQ6 (all domains)
Gene: BT_4675

Molecule: Heparin lyase I

3D Structure

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Related Domains

Browse other domains in Polysacc_lyase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPolysacc_lyase(10.1.1.36)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14099Polysacc_lyase

Polysaccharide lyase

ClanCL0004Concanavalin

External Links

ECOD PDB View: 3IMN RCSB PDB: 3IMN PDBe: 3IMN UniProt: Q89YQ6

Downloads

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