ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jk9C2 - ECOD Domain | ECOD

ECOD/Domains/e5jk9C2

e5jk9C2

UID: 001854597

PDB

Range: C:161-254
PDB: 5JK9 chain C(all domains)
UniProt: Q8IYV9 (all domains)
Gene: IZUMO1

Molecule: Izumo sperm-egg fusion protein 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Izumo-Ig →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIzumo-Ig(11.1.1.217)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16706Izumo-Ig

Izumo-like Immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5JK9 RCSB PDB: 5JK9 PDBe: 5JK9 UniProt: Q8IYV9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure