ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jk9E1 - ECOD Domain | ECOD

ECOD/Domains/e5jk9E1

e5jk9E1

UID: 001854600

PDB

Range: E:161-254
PDB: 5JK9 chain E(all domains)
UniProt: Q8IYV9 (all domains)
Gene: IZUMO1

Molecule: Izumo sperm-egg fusion protein 1

3D Structure

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Related Domains

Browse other domains in Izumo-Ig →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIzumo-Ig(11.1.1.217)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16706Izumo-Ig

Izumo-like Immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5JK9 RCSB PDB: 5JK9 PDBe: 5JK9 UniProt: Q8IYV9

Downloads

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