ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qvcA1 - ECOD Domain | ECOD

ECOD/Domains/e3qvcA1

e3qvcA1

UID: 000185495

RepresentativePDB

Range: A:77P-119P,A:2-328
PDB: 3QVC chain A(all domains)
UniProt: Q9Y006 (all domains)
Gene: PMIII

Molecule: Histo-aspartic protease

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 3QVC RCSB PDB: 3QVC PDBe: 3QVC UniProt: Q9Y006

Downloads

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