ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s1sA1 - ECOD Domain | ECOD

ECOD/Domains/e3s1sA1

e3s1sA1

UID: 000185517

RepresentativePDB

Range: A:6-173
PDB: 3S1S chain A(all domains)
UniProt: G1K3S1 (all domains)
Gene: Bacillus

Molecule: restriction endonuclease BpuSI

3D Structure

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Related Domains

Browse other domains in BpuSI_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyBpuSI_N(2008.1.1.64)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD
MANGANESE (II) IONMN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF15516BpuSI_N

BpuSI N-terminal domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 3S1S RCSB PDB: 3S1S PDBe: 3S1S UniProt: G1K3S1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.