ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s1sA4 - ECOD Domain | ECOD

ECOD/Domains/e3s1sA4

e3s1sA4

UID: 000185520

RepresentativePDB

Range: A:574-875
PDB: 3S1S chain A(all domains)
UniProt: G1K3S1 (all domains)
Gene: Bacillus

Molecule: restriction endonuclease BpuSI

3D Structure

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Related Domains

Browse other domains in BpuSI_TRD →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDNA methylase specificity domain(4333)

HH-groupDNA methylase specificity domain(4333.1)

TT-groupDNA methylase specificity domain(4333.1.1)

FFamilyBpuSI_TRD(4333.1.1.5)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22008BpuSI_TRD

Restriction endonuclease BpuSI, specificity domain

ClanCL0477TRD

External Links

ECOD PDB View: 3S1S RCSB PDB: 3S1S PDBe: 3S1S UniProt: G1K3S1

Downloads

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