ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iitC1 - ECOD Domain | ECOD

ECOD/Domains/e5iitC1

e5iitC1

UID: 001855738

PDB

Range: C:181-367
PDB: 5IIT chain C(all domains)
UniProt: O75367 (all domains)
Gene: MACROH2A1

Molecule: Vacuolar transporter chaperone 4,Core histone macro-H2A.1

3D Structure

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Related Domains

Browse other domains in Macro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMacro domain-like(7529)

HH-groupMacro domain-like(7529.1)

TT-groupMacro domain-like(7529.1.1)

FFamilyMacro(7529.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 3 additives (2-(N-morpholino)ethanesulfonic acid, Sulfate ion, 1,2-ETHANEDIOL)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Pfam Families

Macro domain

ClanCL0223MACRO

External Links

ECOD PDB View: 5IIT RCSB PDB: 5IIT PDBe: 5IIT UniProt: O75367

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.