ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5irgC1 - ECOD Domain | ECOD

ECOD/Domains/e5irgC1

e5irgC1

UID: 001856039

PDB

Range: C:15-304
PDB: 5IRG chain C(all domains)
UniProt: D4L313 (all domains)
Gene: RO1_37670

Molecule: Retron-type reverse transcriptase

3D Structure

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Related Domains

Browse other domains in RVT_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRVT_1(304.48.1.1)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Reverse transcriptase (RNA-dependent DNA polymerase)

ClanCL0027RdRP

External Links

ECOD PDB View: 5IRG RCSB PDB: 5IRG PDBe: 5IRG UniProt: D4L313

Downloads

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