ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4akmA1 - ECOD Domain | ECOD

ECOD/Domains/e4akmA1

e4akmA1

UID: 000185647

RepresentativePDB

Range: A:223-377
PDB: 4AKM chain A(all domains)
UniProt: Q9UQV4 (all domains)
Gene: LAMP3

Molecule: LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN 3

3D Structure

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Related Domains

Browse other domains in Lamp2-like_luminal →

Classification

AArchitecturebeta meanders(a.2)

XX-grouplysosome-associated membrane protein LAMP-3(3369)

HH-grouplysosome-associated membrane protein LAMP-3(3369.1)

TT-grouplysosome-associated membrane protein LAMP-3(3369.1.1)

FFamilyLamp2-like_luminal(3369.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
IRIDIUM (III) IONIR3
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01299Lamp2-like_luminal

Lysosome-associated membrane glycoprotein 2-like, luminal domains

ClanCL0721LAMP

External Links

ECOD PDB View: 4AKM RCSB PDB: 4AKM PDBe: 4AKM UniProt: Q9UQV4

Downloads

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