ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fa1B1 - ECOD Domain | ECOD

ECOD/Domains/e5fa1B1

e5fa1B1

UID: 001856661

PDB

Range: B:214-401
PDB: 5FA1 chain B(all domains)
UniProt: Q6U8B0 (all domains)
Gene: wbbB

Molecule: Putative N-acetyl glucosaminyl transferase

3D Structure

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Related Domains

Browse other domains in Capsule_synth →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyCapsule_synth(7512.1.1.16)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-MonophosphateC5P
drugDrugBank DB03403

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05159Capsule_synth

Capsule polysaccharide biosynthesis protein

ClanCL0113GT-B

External Links

ECOD PDB View: 5FA1 RCSB PDB: 5FA1 PDBe: 5FA1 UniProt: Q6U8B0

Downloads

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