ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fgoA1 - ECOD Domain | ECOD

ECOD/Domains/e4fgoA1

e4fgoA1

UID: 000185747

RepresentativePDB

Range: A:59-244
PDB: 4FGO chain A(all domains)
UniProt: Q5ZXA4 (all domains)
Gene: lpg0828

Molecule: Periplasmic protein

3D Structure

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Related Domains

Browse other domains in Peptidase_C93 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C93(219.1.1.38)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06035Peptidase_C93

Bacterial transglutaminase-like cysteine proteinase BTLCP

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4FGO RCSB PDB: 4FGO PDBe: 4FGO UniProt: Q5ZXA4

Downloads

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