ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hfsA1 - ECOD Domain | ECOD

ECOD/Domains/e5hfsA1

e5hfsA1

UID: 001857811

PDB

Range: A:672-736
PDB: 5HFS chain A(all domains)
UniProt: P95493 (all domains)
Gene: rgpB

Molecule: Gingipain R2

3D Structure

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Related Domains

Browse other domains in Peptidase_M60_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyPeptidase_M60_C(11.1.1.276)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18630Peptidase_M60_C

Peptidase M60 C-terminal domain

ClanCL0159E-set

External Links

ECOD PDB View: 5HFS RCSB PDB: 5HFS PDBe: 5HFS UniProt: P95493

Downloads

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