ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hk2A1 - ECOD Domain | ECOD

ECOD/Domains/e5hk2A1

e5hk2A1

UID: 001857823

PDB

Range: A:34-218
PDB: 5HK2 chain A(all domains)
UniProt: Q99720 (all domains)
Gene: SIGMAR1

Molecule: Sigma non-opioid intracellular receptor 1

3D Structure

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Related Domains

Browse other domains in ERG2_Sigma1R →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyERG2_Sigma1R(10.12.1.21)

Ligands

in contact, ≤ 4 Å

N-(1-benzylpiperidin-4-yl)-4-iodobenzamide61V

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04622ERG2_Sigma1R

ERG2 and Sigma1 receptor like protein

ClanCL0029Cupin

External Links

ECOD PDB View: 5HK2 RCSB PDB: 5HK2 PDBe: 5HK2 UniProt: Q99720

Downloads

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