ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jgdA2 - ECOD Domain | ECOD

ECOD/Domains/e2jgdA2

e2jgdA2

UID: 000185925

RepresentativePDB

Range: A:539-799
PDB: 2JGD chain A(all domains)
UniProt: P0AFG3 (all domains)
Gene: sucA

Molecule: 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2JGD RCSB PDB: 2JGD PDBe: 2JGD UniProt: P0AFG3

Downloads

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