ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b5kA1 - ECOD Domain | ECOD

ECOD/Domains/e5b5kA1

e5b5kA1

UID: 001859419

PDB

Range: A:22-160
PDB: 5B5K chain A(all domains)
UniProt: Q9D9J7 (all domains)
Gene: Izumo1

Molecule: Izumo sperm-egg fusion protein 1

3D Structure

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Related Domains

Browse other domains in IZUMO →

Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupIzumo sperm-egg fusion protein 1 N-terminal domain(611.12)

TT-groupIzumo sperm-egg fusion protein 1 N-terminal domain(611.12.1)

FFamilyIZUMO(611.12.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Izumo sperm-egg fusion, N-terminal domain

ClanCL1015IST

External Links

ECOD PDB View: 5B5K RCSB PDB: 5B5K PDBe: 5B5K UniProt: Q9D9J7

Downloads

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