ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jmvB1 - ECOD Domain | ECOD

ECOD/Domains/e5jmvB1

e5jmvB1

UID: 001860321

PDB

Range: B:1-123
PDB: 5JMV chain B(all domains)
UniProt: Q58530 (all domains)
Gene: MJ1130

Molecule: Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein

3D Structure

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Related Domains

Browse other domains in TsaD →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTsaD(2484.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

tRNA N6-adenosine threonylcarbamoyltransferase

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 5JMV RCSB PDB: 5JMV PDBe: 5JMV UniProt: Q58530

Downloads

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