ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jr2B1 - ECOD Domain | ECOD

ECOD/Domains/e5jr2B1

e5jr2B1

UID: 001860331

PDB

Range: B:28-204
PDB: 5JR2 chain B(all domains)
UniProt: P54764 (all domains)
Gene: EPHA4

Molecule: Ephrin type-A receptor 4

3D Structure

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Related Domains

Browse other domains in Ephrin_lbd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyEphrin_lbd(10.32.1.5)

Ligands

in contact, ≤ 4 Å

Hexane-1,6-DiolHEZ
drugDrugBank DB02210

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01404Ephrin_lbd

Ephrin receptor ligand binding domain

ClanCL0202GBD

External Links

ECOD PDB View: 5JR2 RCSB PDB: 5JR2 PDBe: 5JR2 UniProt: P54764

Downloads

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Drug annotations from DrugDomain.