ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lcvA2 - ECOD Domain | ECOD

ECOD/Domains/e5lcvA2

e5lcvA2

UID: 001860452

PDB

Range: A:1-303
PDB: 5LCV chain A(all domains)
UniProt: A0A024B7W1 (all domains)

Molecule: Polyprotein

3D Structure

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Related Domains

Browse other domains in Flavi_glycoprot →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupViral glycoprotein, central and dimerisation domains-like(5090)

HH-groupViral glycoprotein, central and dimerisation domains(5090.1)

TT-groupViral glycoprotein, central and dimerisation domains(5090.1.1)

FFamilyFlavi_glycoprot(5090.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942

Pfam Families

PF00869Flavi_glycoprot

Flavivirus glycoprotein, central and dimerisation domains

ClanCL0543Viral_gly_cn_dm

External Links

ECOD PDB View: 5LCV RCSB PDB: 5LCV PDBe: 5LCV UniProt: A0A024B7W1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.