ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cdpA2 - ECOD Domain | ECOD

ECOD/Domains/e4cdpA2

e4cdpA2

UID: 001866039

RepresentativePDB

Range: A:40-169
PDB: 4CDP chain A(all domains)
UniProt: Q8X5N8 (all domains)
Gene: ECs_4379

Molecule: PUTATIVE HEME/HEMOGLOBIN TRANSPORT PROTEIN

3D Structure

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Related Domains

Browse other domains in HemS →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupHeme iron utilization protein-like(4216)

HH-groupHeme iron utilization protein-like(4216.1)

TT-groupHeme iron utilization protein-like(4216.1.1)

FFamilyHemS(4216.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT
DrugBank DB01942

Pfam Families

Haemin-degrading HemS.ChuX domain

ClanCL0312HemS_ChuX

External Links

ECOD PDB View: 4CDP RCSB PDB: 4CDP PDBe: 4CDP UniProt: Q8X5N8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.