ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k8fC2 - ECOD Domain | ECOD

ECOD/Domains/e5k8fC2

e5k8fC2

UID: 001866550

PDB

Range: C:11-274
PDB: 5K8F chain C(all domains)
UniProt: J9VFT1 (all domains)
Gene: CNAG_00797

Molecule: Acetyl-coenzyme A synthetase

3D Structure

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Related Domains

Browse other domains in AMP-binding,ACAS_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding,ACAS_N(323.1.1.20)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOL

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

Acetyl-coenzyme A synthetase N-terminus

ClanCL0378ANL

External Links

ECOD PDB View: 5K8F RCSB PDB: 5K8F PDBe: 5K8F UniProt: J9VFT1

Downloads

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