ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kbtD3 - ECOD Domain | ECOD

ECOD/Domains/e5kbtD3

e5kbtD3

UID: 001866603

PDB

Range: D:392-497,D:731-773
PDB: 5KBT chain D(all domains)
UniProt: O88602 (all domains)
Gene: Cacng2

Molecule: Glutamate receptor 2,Voltage-dependent calcium channel gamma-2 subunit

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

FanapanelZK1
drugDrugBank DB12393

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 5KBT RCSB PDB: 5KBT PDBe: 5KBT UniProt: O88602

Downloads

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