ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kk0C1 - ECOD Domain | ECOD

ECOD/Domains/e5kk0C1

e5kk0C1

UID: 001866658

PDB

Range: C:12-490
PDB: 5KK0 chain C(all domains)
UniProt: P74334 (all domains)
Gene: sll1541

Molecule: Apocarotenoid-15,15'-oxygenase

3D Structure

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Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (II) IONFE2
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5KK0 RCSB PDB: 5KK0 PDBe: 5KK0 UniProt: P74334

Downloads

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