ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5kk0D1 - ECOD Domain | ECOD

ECOD/Domains/e5kk0D1

e5kk0D1

UID: 001866659

PDB

Range: D:12-490
PDB: 5KK0 chain D(all domains)
UniProt: P74334 (all domains)
Gene: sll1541

Molecule: Apocarotenoid-15,15'-oxygenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (II) IONFE2
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5KK0 RCSB PDB: 5KK0 PDBe: 5KK0 UniProt: P74334

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure