ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5b7iA4 - ECOD Domain | ECOD

ECOD/Domains/e5b7iA4

e5b7iA4

UID: 001866753

RepresentativePDB

Range: A:683-976
PDB: 5B7I chain A(all domains)
UniProt: Q02ML8 (all domains)
Gene: cas3

Molecule: CRISPR-associated nuclease/helicase Cas3 subtype I-F/YPEST

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas3-like_C_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCas3-like_C_2(2004.1.1.233)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22590Cas3-like_C_2

CRISPR-associated nuclease/helicase Cas3, C-terminal

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5B7I RCSB PDB: 5B7I PDBe: 5B7I UniProt: Q02ML8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure