ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5e8jA1 - ECOD Domain | ECOD

ECOD/Domains/e5e8jA1

e5e8jA1

UID: 001866762

RepresentativePDB

Range: A:169-476
PDB: 5E8J chain A(all domains)
UniProt: O43148 (all domains)
Gene: RNMT

Molecule: mRNA cap guanine-N7 methyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in mRNA_G-N7_MeTrfase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilymRNA_G-N7_MeTrfase(2003.1.5.28)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF03291mRNA_G-N7_MeTrfase

mRNA (guanine-N(7))-methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5E8J RCSB PDB: 5E8J PDBe: 5E8J UniProt: O43148

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.