ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ejrA2 - ECOD Domain | ECOD

ECOD/Domains/e5ejrA2

e5ejrA2

UID: 001866764

RepresentativePDB

Range: A:2057-2151
PDB: 5EJR chain A(all domains)
UniProt: Q9U1M8 (all domains)
Gene: myoI

Molecule: Myosin-I heavy chain

3D Structure

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Related Domains

Browse other domains in RA_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRA_2(221.1.1.76)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RA like domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5EJR RCSB PDB: 5EJR PDBe: 5EJR UniProt: Q9U1M8

Downloads

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