ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zrpD2 - ECOD Domain | ECOD

ECOD/Domains/e4zrpD2

e4zrpD2

UID: 001866847

PDB

Range: D:53-89,D:130-131
PDB: 4ZRP chain D(all domains)
UniProt: Q9NPF0 (all domains)
Gene: CD320

Molecule: CD320 antigen

3D Structure

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Related Domains

Browse other domains in Ldl_recept_a →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupLDL receptor-like module(389.3)

TT-groupLDL receptor-like module(389.3.1)

FFamilyLdl_recept_a(389.3.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00057Ldl_recept_a

Low-density lipoprotein receptor domain class A

External Links

ECOD PDB View: 4ZRP RCSB PDB: 4ZRP PDBe: 4ZRP UniProt: Q9NPF0

Downloads

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