ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ccqA1 - ECOD Domain | ECOD

ECOD/Domains/e5ccqA1

e5ccqA1

UID: 001866935

PDB

Range: A:2-165
PDB: 5CCQ chain A(all domains)
UniProt: P30405 (all domains)
Gene: PPIF

Molecule: Peptidyl-prolyl cis-trans isomerase F, mitochondrial

3D Structure

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Related Domains

Browse other domains in Pro_isomerase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupCyclophilin-like(75)

HH-groupCyclophilin-like(75.1)

TT-groupCyclophilin-like(75.1.1)

FFamilyPro_isomerase(75.1.1.1)

Ligands

in contact, ≤ 4 Å

ethyl N-{[(2-aminopyridin-4-yl)methyl]carbamoyl}glycinate502
Potassium ionK
metal

+ 3 additives (Formic acid, Triethylene glycol, Tetraethylene glycol)

Formic acidFMT

Pfam Families

PF00160Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

ClanCL0475Cyclophil-like

External Links

ECOD PDB View: 5CCQ RCSB PDB: 5CCQ PDBe: 5CCQ UniProt: P30405

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01942

Triethylene glycolPGE

DrugBank DB02327

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.