ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cikA1 - ECOD Domain | ECOD

ECOD/Domains/e5cikA1

e5cikA1

UID: 001866946

PDB

Range: A:25-164
PDB: 5CIK chain A(all domains)
UniProt: Q8P839 (all domains)
Gene: pepQ

Molecule: Proline dipeptidase

3D Structure

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Related Domains

Browse other domains in Creatinase_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupCreatinase/prolidase N-terminal domain(2484.3)

TT-groupCreatinase/prolidase N-terminal domain(2484.3.1)

FFamilyCreatinase_N(2484.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, Glycerin)

Citric acidCIT
DrugBank DB04272
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01321Creatinase_N

Creatinase/Prolidase N-terminal domain

ClanCL0356AMP_N-like

External Links

ECOD PDB View: 5CIK RCSB PDB: 5CIK PDBe: 5CIK UniProt: Q8P839

Downloads

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