ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cnxA2 - ECOD Domain | ECOD

ECOD/Domains/e5cnxA2

e5cnxA2

UID: 001866994

PDB

Range: A:126-360
PDB: 5CNX chain A(all domains)
UniProt: P76524 (all domains)
Gene: ypdF

Molecule: Aminopeptidase YpdF

3D Structure

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Related Domains

Browse other domains in Peptidase_M24 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupCreatinase/aminopeptidase-like(283)

HH-groupCreatinase/aminopeptidase(283.1)

TT-groupCreatinase/aminopeptidase(283.1.1)

FFamilyPeptidase_M24(283.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00557Peptidase_M24

Metallopeptidase family M24

External Links

ECOD PDB View: 5CNX RCSB PDB: 5CNX PDBe: 5CNX UniProt: P76524

Downloads

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