ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fraC1 - ECOD Domain | ECOD

ECOD/Domains/e5fraC1

e5fraC1

UID: 001867078

PDB

Range: C:1-189
PDB: 5FRA chain C(all domains)
UniProt: A0A0H2YQR1 (all domains)
Gene: nanI

Molecule: SIALIDASE

3D Structure

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Related Domains

Browse other domains in Sialidase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySialidase(10.1.1.18)

Ligands

in contact, ≤ 4 Å

N-acetyl-alpha-neuraminic acidSIA
drugDrugBank DB03721within 5 Å only

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Pfam Families

PF02973Sialidase

Sialidase, N-terminal domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5FRA RCSB PDB: 5FRA PDBe: 5FRA UniProt: A0A0H2YQR1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.