ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g4bA1 - ECOD Domain | ECOD

ECOD/Domains/e5g4bA1

e5g4bA1

UID: 001867100

PDB

Range: A:116-267
PDB: 5G4B chain A(all domains)
UniProt: Q86925 (all domains)

Molecule: CAPSID PROTEIN

3D Structure

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Related Domains

Browse other domains in Peptidase_S3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S3(1.1.5.4)

Ligands

in contact, ≤ 4 Å

PiperazinePZE
drugDrugBank DB00592

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00944Peptidase_S3

Alphavirus core protein

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5G4B RCSB PDB: 5G4B PDBe: 5G4B UniProt: Q86925

Downloads

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