ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5js2A2 - ECOD Domain | ECOD

ECOD/Domains/e5js2A2

e5js2A2

UID: 001867212

PDB

Range: A:579-835
PDB: 5JS2 chain A(all domains)
UniProt: Q9UKV8 (all domains)
Gene: AGO2

Molecule: Protein argonaute-2

3D Structure

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Related Domains

Browse other domains in Piwi →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPiwi(2484.1.1.26)

Ligands

in contact, ≤ 4 Å

PhenolIPH
drugDrugBank DB03255
Magnesium ionMG
metal

+ 1 additive (Phosphate ion)

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 5JS2 RCSB PDB: 5JS2 PDBe: 5JS2 UniProt: Q9UKV8

Downloads

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Phosphate ion

DrugBank DB14523within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.