ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k16B1 - ECOD Domain | ECOD

ECOD/Domains/e5k16B1

e5k16B1

UID: 001867230

PDB

Range: B:19-149,B:169-370
PDB: 5K16 chain B(all domains)
UniProt: O75317 (all domains)
Gene: USP12

Molecule: Ubiquitin carboxyl-terminal hydrolase 12

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5K16 RCSB PDB: 5K16 PDBe: 5K16 UniProt: O75317

Downloads

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