ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k1bA1 - ECOD Domain | ECOD

ECOD/Domains/e5k1bA1

e5k1bA1

UID: 001867238

PDB

Range: A:40-143,A:169-370
PDB: 5K1B chain A(all domains)
UniProt: O75317 (all domains)
Gene: USP12

Molecule: Ubiquitin carboxyl-terminal hydrolase 12

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyUCH(219.1.1.3)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin carboxyl-terminal hydrolase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 5K1B RCSB PDB: 5K1B PDBe: 5K1B UniProt: O75317

Downloads

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