ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5g0iB1 - ECOD Domain | ECOD

ECOD/Domains/e5g0iB1

e5g0iB1

UID: 001868265

PDB

Range: B:442-801
PDB: 5G0I chain B(all domains)
UniProt: F8W4B7 (all domains)
Gene: hdac6

Molecule: HDAC6

3D Structure

Loading viewer...

Related Domains

Browse other domains in Hist_deacetyl →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupArginase/deacetylase(2006.1.5)

FFamilyHist_deacetyl(2006.1.5.2)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Nexturastat aN4R
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00850Hist_deacetyl

Histone deacetylase domain

ClanCL0302Arginase

External Links

ECOD PDB View: 5G0I RCSB PDB: 5G0I PDBe: 5G0I UniProt: F8W4B7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure