ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g5lA1 - ECOD Domain | ECOD

ECOD/Domains/e5g5lA1

e5g5lA1

UID: 001868374

PDB

Range: A:1-141,A:174-273,A:312-463
PDB: 5G5L chain A(all domains)
UniProt: P10964 (all domains)
Gene: RPA190

Molecule: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246)

HH-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1)

TT-groupN-terminal domain in RNA-polymerase beta-prime subunit(4246.1.1)

FFamilyRNA_pol_Rpb1_1(4246.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04997RNA_pol_Rpb1_1

RNA polymerase Rpb1, domain 1

External Links

ECOD PDB View: 5G5L RCSB PDB: 5G5L PDBe: 5G5L UniProt: P10964

Downloads

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