ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hafB1 - ECOD Domain | ECOD

ECOD/Domains/e5hafB1

e5hafB1

UID: 001868429

RepresentativePDB

Range: B:24-340
PDB: 5HAF chain B(all domains)

Molecule: Deubiquitinase SseL

3D Structure

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Related Domains

Browse other domains in ElaD-SseL-like_C,ElaD_SseL-like_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyElaD-SseL-like_C,ElaD_SseL-like_N(219.1.1.67)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22102ElaD-SseL-like_C

ElaD/SseL-like C-terminal

ClanCL0125Peptidase_CA

PF22103ElaD_SseL-like_N

ElaD/SseL N-terminal domain

ClanCL0020TPR

External Links

ECOD PDB View: 5HAF RCSB PDB: 5HAF PDBe: 5HAF

Downloads

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