ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hjoC3 - ECOD Domain | ECOD

ECOD/Domains/e5hjoC3

e5hjoC3

UID: 001868442

PDB

Range: C:829-944
PDB: 5HJO chain C(all domains)
UniProt: Q8BHN3 (all domains)
Gene: Ganab

Molecule: Neutral alpha-glucosidase AB

3D Structure

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Related Domains

Browse other domains in DUF5110 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupPutative glucosidase YicI, C-terminal domain(4178)

HH-groupPutative glucosidase YicI, C-terminal domain(4178.1)

TT-groupPutative glucosidase YicI, C-terminal domain(4178.1.1)

FFamilyDUF5110(4178.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (Acetate, Formic acid)

AcetateACT
DrugBank DB14511
Formic acid

Pfam Families

PF17137DUF5110

Domain of unknown function (DUF5110)

External Links

ECOD PDB View: 5HJO RCSB PDB: 5HJO PDBe: 5HJO UniProt: Q8BHN3

Downloads

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DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.