ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j2pB1 - ECOD Domain | ECOD

ECOD/Domains/e5j2pB1

e5j2pB1

UID: 001869468

PDB

Range: B:302-428
PDB: 5J2P chain B(all domains)
UniProt: P04585 (all domains)
Gene: gag-pol

Molecule: reverse transcriptase, p51 domain

3D Structure

Loading viewer...

Related Domains

Browse other domains in RVT_connect →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRNaseH-like domain in reverse transcriptase(2484.5)

TT-groupRNaseH-like domain in reverse transcriptase(2484.5.1)

FFamilyRVT_connect(2484.5.1.1)

Pfam Families

PF06815RVT_connect

Reverse transcriptase connection domain

External Links

ECOD PDB View: 5J2P RCSB PDB: 5J2P PDBe: 5J2P UniProt: P04585

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure