ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5j2pB3 - ECOD Domain | ECOD

ECOD/Domains/e5j2pB3

e5j2pB3

UID: 001869470

PDB

Range: B:4-216
PDB: 5J2P chain B(all domains)
UniProt: P04585 (all domains)
Gene: gag-pol

Molecule: reverse transcriptase, p51 domain

3D Structure

Loading viewer...

Related Domains

Browse other domains in RVT_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRVT_1(304.48.1.1)

Pfam Families

Reverse transcriptase (RNA-dependent DNA polymerase)

ClanCL0027RdRP

External Links

ECOD PDB View: 5J2P RCSB PDB: 5J2P PDBe: 5J2P UniProt: P04585

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure