ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5kjdE1 - ECOD Domain | ECOD

ECOD/Domains/e5kjdE1

e5kjdE1

UID: 001869646

PDB

Range: E:12-490
PDB: 5KJD chain E(all domains)
UniProt: P74334 (all domains)
Gene: sll1541

Molecule: Apocarotenoid-15,15'-oxygenase

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

FE (II) IONFE2
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5KJD RCSB PDB: 5KJD PDBe: 5KJD UniProt: P74334

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure