ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fjvA1 - ECOD Domain | ECOD

ECOD/Domains/e5fjvA1

e5fjvA1

UID: 001870836

PDB

Range: A:34-239
PDB: 5FJV chain A(all domains)
UniProt: Q15822 (all domains)
Gene: CHRNA2

Molecule: NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA-2

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

EpibatidineEPJ
drugDrugBank DB07720

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 5FJV RCSB PDB: 5FJV PDBe: 5FJV UniProt: Q15822

Downloads

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