ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gmzC1 - ECOD Domain | ECOD

ECOD/Domains/e5gmzC1

e5gmzC1

UID: 001870857

PDB

Range: C:1-143
PDB: 5GMZ chain C(all domains)
UniProt: P03147 (all domains)
Gene: C

Molecule: Core protein

3D Structure

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Related Domains

Browse other domains in Hepatitis_core →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHepatitis B viral capsid (hbcag)(625)

HH-groupHepatitis B viral capsid (hbcag)(625.1)

TT-groupHepatitis B viral capsid (hbcag)(625.1.1)

FFamilyHepatitis_core(625.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-4,4-difluoro-1-[[(4S)-4-(4-fluorophenyl)-5-methoxycarbonyl-4-methyl-2-(1,3-thiazol-2-yl)-1H-pyrimidin-6-yl]methyl]pyrrolidine-2-carboxylic acid6XU

+ 2 additives (Glycerin, Isopropyl alcohol)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00906Hepatitis_core

Hepatitis core antigen

External Links

ECOD PDB View: 5GMZ RCSB PDB: 5GMZ PDBe: 5GMZ UniProt: P03147

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Isopropyl alcohol

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.