ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kvaA1 - ECOD Domain | ECOD

ECOD/Domains/e5kvaA1

e5kvaA1

UID: 001871161

PDB

Range: A:35-261
PDB: 5KVA chain A(all domains)
UniProt: C5Z4W3 (all domains)
Gene: SORBI_3010G052200

Molecule: caffeoyl-CoA O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_3(2003.1.5.14)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01596Methyltransf_3

O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5KVA RCSB PDB: 5KVA PDBe: 5KVA UniProt: C5Z4W3

Downloads

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