ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kveE1 - ECOD Domain | ECOD

ECOD/Domains/e5kveE1

e5kveE1

UID: 001871163

PDB

Range: E:303-403
PDB: 5KVE chain E(all domains)
UniProt: A0A024B7W1 (all domains)

Molecule: Genome polyprotein

3D Structure

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Related Domains

Browse other domains in Flavi_glycop_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyFlavi_glycop_C(11.1.1.43)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 3 additives (Acetate, Sulfate ion, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
Sulfate ionSO4

Pfam Families

PF02832Flavi_glycop_C

Flavivirus glycoprotein, immunoglobulin-like domain

ClanCL0159E-set

External Links

ECOD PDB View: 5KVE RCSB PDB: 5KVE PDBe: 5KVE UniProt: A0A024B7W1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.