ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5eyaF1 - ECOD Domain | ECOD

ECOD/Domains/e5eyaF1

e5eyaF1

UID: 001871470

PDB

Range: F:6-81
PDB: 5EYA chain F(all domains)
UniProt: Q14258 (all domains)
Gene: TRIM25

Molecule: Tripartite motif-containing 25 variant

3D Structure

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Related Domains

Browse other domains in zf-RING_UBOX →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-RING_UBOX(376.1.1.20)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13445zf-RING_UBOX

RING-type zinc-finger

ClanCL0229RING

External Links

ECOD PDB View: 5EYA RCSB PDB: 5EYA PDBe: 5EYA UniProt: Q14258

Downloads

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