ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fq9A2 - ECOD Domain | ECOD

ECOD/Domains/e5fq9A2

e5fq9A2

UID: 001871487

PDB

Range: A:19-61,A:160-264
PDB: 5FQ9 chain A(all domains)
UniProt: P14489 (all domains)
Gene: OXA-10

Molecule: BETA-LACTAMASE OXA-10

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

(3R)-3-(cyclohexylcarbonylamino)-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acidC6S

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
Glycerin

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5FQ9 RCSB PDB: 5FQ9 PDBe: 5FQ9 UniProt: P14489

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.